Back to homepage Domain of application

Agriculture, Environment & Natural Resources

Our expertise in microbiology and molecular biology enables us to support your environmental projects based on the exploitation and preservation of natural resources, for the health of plants and environmental microbial communities. Let’s work together on your projects at every stage, from research to bioprocesses.

Ask for a quote

Who are you?
What are you looking for?

In the context of your programs exploiting the potential of living organisms to improve the health of plants and aquatic environments, you are looking for a partner offering customized in vitro analyses in microbiology and molecular biology to support you in the development of agroecological microbiological solutions at all stages. You’ve found it! Smaltis is able to study your needs and offer you a tailored solution, with honest and informed scientific advice.

The products you plan to develop

  • Living microorganisms
  • Rhizospheric bacterial strains
  • Biocontrol products
  • Probiotic biostimulants
  • Agricultural probiotics
  • Biofertilizers
  • Development of bio-inspired processes
  • Aquaculture products

The approaches you work on

Are you developing approaches based on the agricultural microbiome to enable the development of phytobeneficial microbial communities? Are your goals the growth and resistance of plants? Are you looking to preserve or restore soil ecology? Do you want to develop the agronomic potential of crops? Are you working on aquaculture or treatment station projects? Whatever your development focus, turn to Smaltis. We can accompany you to successfully complete your project with expertise and scientific rigor!

Our offer

At what stage are you?

DEVELOPMENT STAGES 1

RESEARCH AND SELECTION

2

PROOF OF CONCEPT/EFFICACY

3

BIOPROCESSES/FERMENTATION

OUR SERVICES

Screening of candidates
Identification of strains
Characterization of products in terms of functionality and safety

Understanding of mechanisms of action
Biomarker research
Support for the study and understanding of plant microbiota

Development and optimization of fermentation processes
Supply and optimization of strains

Why choose Smaltis?

Our solutions empower you to accelerate, enhance, and secure your developments within a rigorous scientific framework. With its experience, maturity, and informed guidance, Smaltis will share the various experiments that are possible and tailored to your needs, always in close collaboration with your teams. You will be regularly updated on the progress of the manipulations, their unfolding, and provided with all the necessary data for the continuation of your project, yielding clear and robust results.

Get in touch!

They trust us

Testimonials and references

Nicolas COULIN
Laboratory Manager
SOLICAZ

Solicaz develops natural bacterial biostimulation solutions to meet the challenges of agro-ecological transition and climate change. These PGPG (Plant Growth Promoting Rhizobacteria) bacteria provide benefits for improving plant growth and resistance. In order to exploit their full potential, we needed to call on a molecular biology expert to robustly determine the identity of a pool of selected strains. We identified Smaltis, who fully met our expectations by providing comprehensive expertise. The laboratory proved to be a true partner of choice, with whom we worked jointly to identify and test the method best suited to our needs. Their flexibility and commitment ensure that we have reliable results, and despite the geographical distance that separates us, our various subsidiaries will continue to work with Smaltis.

Nicolas CHABERT
Chief Technical Officer
BIOINTRANT

As part of the development of our microbial biostimulants, and to ensure the health and safety of users of our products, we needed to evaluate the cytotoxicity of bacterial strains against a cell line. In this context, we turned to Smaltis to meet our needs. Their attentiveness and rigor in setting up the experimental conditions to perfectly match the expectations of the project, as well as the regular exchanges we benefited from, totally satisfied us. The analyses carried out met our strictest expectations in terms of safety of use, and provided us with reliable, interpretable results.

Sandrine CLAUS
Founder & CEO
STARFISH BIOSCIENCE

I contacted Smaltis to urgently retrieve and secure a particularly valuable strain collection derived from our soil ecology research and essential to a high-stakes R&D project. Their responsiveness was decisive: within a few days, everything was organized, documented, and fully taken care of — a prerequisite for preserving the integrity and scientific value of these isolates. Beyond secure storage, collaborating with the Smaltis team allows me to continue the planned work on this collection directly at their facilities. This operational continuity greatly simplifies project management and prevents any interruption in our research workflow, especially for strains that are difficult to re-collect in the field. This partnership brings genuine peace of mind to my team. We know our strains are in good hands, kept in a controlled environment and monitored by an expert, reliable and responsive team. In a field where every sample matters, this level of care truly makes a difference.

Jérôme SCHMEISSER
Biology Lab Manager
DSM-FIRMENICH

In the context of our developments in animal health dietary supplements, we turned to SMALTIS to assess the impact of our products on the expression of genes of interest in different tissues. The molecular biology expertise of SMALTIS allows us to rely on this laboratory, whose qualitative results provide us with robust and reliable data. We also benefit from constructive exchanges with their teams to progress together throughout the project. SMALTIS thus constitutes a true extension of our R&D department, allowing us to focus on our own expertise while relying on this partner with whom we will continue to collaborate.

Delphine GALLAND
Head of Preclinical Clinical Studies
VETOQUINOL

For the past 10 years, we have regularly turned to Smaltis for their services and expertise in microbiology, cellular biology, and molecular biology. The entrusted work focused on evaluating the efficacy and safety of various products related to infectious diseases. The smoothness of our interactions, the responsiveness of the entire team, and their adaptation to our regulatory requirements have allowed us to advance our research projects optimally. The trust we have placed in Smaltis over these 10 years has led us to include this provider among our preferred contacts.

Caroline GEBUS
Microbiology Quality Control
OM Pharma

We use Escherichia coli strains to manufacture our Uro-Vaxom® product for the prevention of recurrent lower urinary tract infections and co-treatment of acute urinary tract infections and, in accordance with regulatory requirements, we must demonstrate the stability of our strains. We therefore asked Smaltis to develop a tailor-made quality control method. In addition to their ability to listen to customer needs and propose new ideas, the Smaltis team has also distinguished itself by the quality and accuracy of its analysis reports. At present, the partnership established with Smaltis is a real asset for OM Pharma.

News and articles

Management of Microbiological Contamination: Identifying, Understanding and Preventing Recurrence

Microbiological contamination is not limited to a non-compliant result. In R&D development, quality control, an industrial process or biological production, it immediately raises concrete questions: where does the contaminant come from, is it isolated or recurrent, what is its impact, and how can its reappearance be prevented?

The response is not simply to identify the bacterium and then restart the process. To achieve lasting control of bacterial contamination, the investigation must be able to connect laboratory observations with the real operational context: samples, flows, raw materials, equipment, cleaning, disinfection and field practices.

At Smaltis, we approach these situations as a structured microbiological investigation: understanding the problem, isolating the contaminants, identifying and comparing the isolates, preserving useful material, and then testing appropriate prevention solutions.

READ THE POST

Skin Microbiome: Cultivating Rigor to Objectify Innovation

The skin microbiome is not mere scenery. It is a functional component of the skin, involved in protection against pathogens, immune dialogue, and the modulation of inflammation. It is a dynamic ecosystem shaped by subtle interactions between bacteria, yeasts, the host, and the environment.

Our approach is grounded in a simple conviction: understanding a microbiome is not merely about identifying it. It is about knowing how to culture it, interrogate it, and generate scientifically defensible data.

This is precisely how we approach the skin microbiome: as a complex ecosystem whose actors, dynamics, and mechanisms must be mastered before attempting to modulate its balance.

READ THE POST

The Story of a Microbiota That Became a Medicine

Once upon a time, in the hospitals of the twenty-first century, there was an infection that even antibiotics could no longer silence. An opportunistic infection caused by a bacterium called Clostridioides difficile, it often appeared in patients who were already vulnerable… and, above all, already heavily treated. Let us look back at the history of this infection, which gave rise to new therapeutic approaches.

READ THE POST

Probiotic Characterization: Demonstrating Safety and Substantiating Activity

Probiotics are often presented as a simple category. In reality, their characterization has become a demanding scientific and regulatory exercise. It is no longer enough to identify a species or to invoke a favorable history of use: the demonstration must now be conducted at the strain level, in a way that is consistent with the intended use, the target population, and the applicable regulatory framework. In the main reference frameworks, a microorganism can be qualified as a probiotic in the strict sense only if it is sufficiently characterized, safe for its intended use, alive at a relevant dose until the end of the product’s shelf life, and associated with a documented health benefit. [1,5,7,8]

The key question therefore becomes: what can we robustly demonstrate about its identity, safety, and functional activity? This is particularly true for new or poorly documented strains, for which taxonomy alone is not sufficient. The EFSA, GRAS, and Canadian frameworks converge on one central point: useful characterization is strain-level characterization interpreted in light of the final use. [1-6]

READ THE POST

Designing Bacterial Mutants: From Gene Editing to Robust Strain Engineering

The construction of bacterial mutants is a cornerstone of microbiology. Historically used to decipher gene function, it now plays an equally strategic role in bioproduction, biotechnology, and the development of therapeutic bacteria, where the engineered strain itself may ultimately become the final product.

This shift has profoundly changed how mutagenesis projects are approached. Today, the objective is no longer simply to modify a gene, but to design a strain aligned with its final application, operational constraints, and regulatory expectations.

READ THE POST

Lugdunin: the secret weapon of an indomitable bacterium

Once upon a time, an invisible battle was raging deep inside our noses. A microscopic battlefield, where bacteria fought relentlessly to defend their territory. Picture a small village of indomitable Gauls, surrounded on all sides… but instead of Romans, it’s microbes. And in this surprisingly strategic setting, a most unexpected antibiotic was discovered: lugdunin.

READ THE POST

2026: Taking on New Scientific Challenges Together

As we step into 2026, the entire Smaltis team sends you our warmest wishes. May this new year bring clarity, creativity, meaningful collaborations — and a few scientific breakthroughs that get the attention they deserve.

READ THE POST

Antimicrobial activity testing: measuring, understanding, and anticipating resistance

Every day, antimicrobials face their natural adversaries: bacteria.
But in this silent war, nothing remains static — bacteria learn, adapt, defend themselves… and develop increasingly sophisticated resistance mechanisms.
Smaltis is a microbiology CRO specialized in the study of antimicrobial resistance and the preclinical development of antimicrobials.
We support the developers of new antibiotics, peptides, biocides, and other anti-infective agents with a comprehensive panel of in vitro assays designed to meet the most demanding R&D challenges.

READ THE POST

Meeting the Innovation

Smaltis at the Key Industry Events of Autumn 2025! From medical devices to biotherapies, from fundamental research to industrial production, we meet project leaders to better understand microbiology needs and build new collaborations.

READ THE POST

New Offer Structure: 2 Business Units Supporting Your Projects

At Smaltis, our ambition remains unchanged: bringing microbiological excellence to your innovations.
To better address the diversity of your needs, we have structured our offer around 2 complementary Business Units, true pillars of our scientific and technical commitment.

READ THE POST

Let's study your project!

Are you interested in our services? Ask our experts to study your needs and design a tailor-made collaboration with you.

Book a discovery call